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Component Inactivation Reference Sets

The active field of each component version indicates whether a component is active or inactive. However, it does not provide any information about why a concept or description has been inactivated. The reason why a concept or description has been inactivated is indicated by a row in a component Inactivation reference set. The reason for inactivation may determine the appropriate way to deal with data in existing records, protocols or queries that use a concept or description after it has been inactivated.

The two component inactivation Reference Sets are shown in the table below.

Component Inactivation Reference Sets

Reference Set Id and Name
Note

The reason for inactivation is specified by a concept enumeration.

The permitted values for this enumeration for a concept are documented in the Editorial Guide pages on Concept Inactivation, and the type of historical association that should be applied is also provided.

Additionally, the inactivation reasons that may be stated for description inactivation are documented in this page: Description Inactivation

Related Links

  • See also the formal specification of .

Indicates the reason that a concept has been made inactive.

Indicates the reason that a description has been made inactive.

Attribute Value Reference Sets
Provide Feedback
900000000000489007 |Concept inactivation indicator attribute value reference set|
900000000000490003 |Description inactivation indicator attribute value reference set|

Attribute Value Reference Set

Purpose

An 900000000000480006 | Attribute value type reference set| allows a value from a specified range to be associated with a component. This type of reference set can be used for a range of purposes where there is a requirement to provide additional information about particular concepts, descriptions or relationships. For example, an |Attribute value type reference set| is used to indicate the reason why a concept has been inactivated.

Data Structure

An Attribute value reference set is a component reference set used to apply a tagged value to a SNOMED CT component. Its structure is shown in the following table.

Attribute Value Reference Set - Data Structure

Field
Data type
Purpose
Mutable
PK*

The metadata concepts shown below are examples of concepts that identify attribute value reference sets.

Attribute Value Reference Sets in the Metadata Hierarchy

< Not currently used


Concept Inactivation Values (with usage notes referring to the International Release)

< New introduced 2017-07-31 < NEVER used for descriptions in the International Release - may have been used in extensions


Description Inactivation Values (with usage notes referring to the International Release)

< New introduced 2017-07-31 < New introduced 2017-07-31 < NOT used for description inactivations after 2010-07-31 < NOT used for description inactivations before 2016-07-31 or after 2017-07-31 < NOT used for description inactivations before 2016-07-31 or after 2017-07-31 < NOT used for description inactivations before 2008-07-31 or after 2017-07-31 < NEVER used for descriptions in the International Release - may have been used in extensions


The tables below show the descriptors that define examples of reference sets that follow the pattern.

Refset Descriptor Rows for the Concept Inactivation Indicator Reference Set

refsetId
referencedComponentId (Referenced component)
attributeDescription (Attribute description)
attributeType (Attribute type)
attributeOrder (Attribute order)

Refset Descriptor Rows for the Description Inactivation Indicator Reference Set

refsetId
referencedComponentId (Referenced component)
attributeDescription (Attribute description)
attributeType (Attribute type)
attributeOrder (Attribute order)

Sample Rows from the Concept Inactivation Indicator Reference Set

refsetId
referencedComponentId (Referenced component)
valueId (Concept inactivation value)

Boolean

The state of the identified reference set member as at the specified effectiveTime. If active = 1 (true) the reference set member is part of the current version of the set, if active = 0 (false) the reference set member is not part of the current version of the set.

YES

NO

moduleId

SCTID

Identifies the SNOMED CT module that contains this reference set member as at the specified effectiveTime .

The value must be a subtype of within the metadata hierarchy.

YES

NO

refsetId

SCTID

Identifies the reference set to which this reference set member belongs.

In this case, a subtype descendant of:

NO

NO

referencedComponentId

SCTID

A reference to the SNOMED CT component to be included in the reference set.

NO

NO

valueId

SCTID

The tagged value applied to the referencedComponentId. A subtype of .

YES

NO

1

1

id

UUID

A 128 bit unsigned Integer, uniquely identifying this reference set member.Different versions of a reference set member share the same id but have different effectiveTime. This allows a reference set member to be modified or made inactive (i.e. removed from the active set) at a specified time.

NO

YES (Full/Snapshot)

effectiveTime

Time

The inclusive date or time at which this version of the identified reference set member became the current version.

Note : In distribution files the effectiveTime should follow the short ISO date format (YYYYMM DD) and should not include the hours, minutes, seconds or timezone indicator.The current version of this reference set member at time T is the version with the most recent effectiveTime prior to or equal to time T.

YES

YES (Full) Optional (Snapshot)

900000000000456007 |Reference set descriptor|

900000000000489007 |Concept inactivation indicator reference set|

449608002 |Referenced component|

900000000000461009 |Concept type component|

900000000000456007 |Reference set descriptor|

900000000000490003 |Description inactivation indicator reference set|

449608002 |Referenced component|

900000000000462002 |Description type component|

900000000000489007 |Concept inactivation indicator reference set|

105000 |Poisoning by pharmaceutical excipient|

900000000000482003 |Duplicate|

900000000000489007 |Concept inactivation indicator reference set|

123008 |Channel catfish virus disease|

PK* indicates if the attribute is part of the primary key for that file/table.

Metadata

Note. Other attribute value reference sets exist but are not used to track component inactivation

Reference Set Descriptor and Example Data

Notes on the tables used to show descriptors and examples

The reference set example tables on this page have been revised as follows to aid clarity and understanding:

  • The first four columns which are present in all release files are not shown. The omitted columns (id, effectiveTime, active, moduleId) are used in the same way in all referenced sets to support identification, versioning and packaging. They do not directly affect the specific features of a particular reference set or reference set type.

  • Reference set columns that contain SNOMED CT identifiers are expanded to show details of the concept or description referenced by that identifier. In some cases, the term is shown in the same column using the expression syntax, in other cases an additional column with a name suffix '_term' has been added. In the standard reference set files only the identifier is present in the column and there is no added column for the term. When using reference sets, the term and other details of the component are looked up from the relevant component release files.

Descriptor Template

900000000000454005 |Foundation metadata concept|
900000000000455006 |Reference set|
900000000000480006 |Attribute value type|
900000000000489007 |Concept inactivation indicator reference set|
900000000000490003 |Description inactivation indicator reference set|
900000000000547002 |Relationship inactivation indicator reference set|
900000000001043018 |Concept inactivation value|
723277005 |Nonconformance to editorial policy component|
900000000000482003 |Duplicate|
900000000000483008 |Outdated|
900000000000484002 |Ambiguous|
900000000000485001 |Erroneous|
900000000000486000 |Limited|
900000000000487009 |Moved elsewhere|
900000000000492006 |Pending move|
900000000001077011 |Description inactivation value|
723277005 |Nonconformance to editorial policy component|
723278000 |Not semantically equivalent component|
900000000000483008 |Outdated|
900000000000485001 |Erroneous|
900000000000495008 |Concept non-current|
900000000000486000 |Limited|
900000000000487009 |Moved elsewhere|
900000000000482003 |Duplicate|
900000000000494007 |Inappropriate|
900000000000492006 |Pending move|
|Attribute value type reference set|
Provide Feedback

active

0

0

900000000000443000 |Module (core metadata concept)|
900000000000480006 |Attribute value type reference set|
900000000000491004 | Attribute value|
900000000000456007 |Reference set descriptor|
900000000000489007 |Concept inactivation indicator reference set|
900000000000481005 |Concept inactivation value|
900000000000461009 |Concept type component|
900000000000456007 |Reference set descriptor|
900000000000490003 |Description inactivation indicator reference set|
900000000000493001 |Description inactivation value|
900000000000461009 |Concept type component|
900000000000487009 |Moved elsewhere|
900000000000489007 |Concept inactivation indicator reference set|
141000 |Glaucoma as birth trauma|
900000000000482003 |Duplicate|
900000000000489007 |Concept inactivation indicator reference set|
157000 |AIDS with low vision|
900000000000484002 |Ambiguous|
900000000000489007 |Concept inactivation indicator reference set|
190000 |Partial hysterectomy|
900000000000484002 |Ambiguous|
900000000000489007 |Concept inactivation indicator reference set|
203004 |Replacement of pacemaker in brain|
900000000000484002 |Ambiguous|
900000000000489007 |Concept inactivation indicator reference set|
212002 |Salmonella III arizonae 53:k:z|
900000000000483008 |Outdated|
900000000000489007 |Concept inactivation indicator reference set|
215000 |Operative procedure on fingers|
900000000000482003 |Duplicate|
900000000000489007 |Concept inactivation indicator reference set|
220000 |Unspecified monoarthritis|
900000000000486000 |Limited|
900000000000489007 |Concept inactivation indicator reference set|
236003 |Incision of vein|
900000000000484002 |Ambiguous|